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Table 2 List of SNPs in HNPCC genes predicted by PupaSuite.

From: Investigation on the role of nsSNPs in HNPCC genes – a bioinformatics approach

Gene ids SNP ids Region Functional significance
MLH1 rs11541859 Coding nonsynonymous Exonic splicing enhancers
  rs1799977 Coding nonsynonymous Exonic splicing enhancers
  rs1800149 Coding nonsynonymous Exonic splicing enhancers
  rs34213726 Coding nonsynonymous Exonic splicing enhancers
  rs34285587 Coding nonsynonymous Exonic splicing enhancers
  rs35045067 Coding nonsynonymous Exonic splicing enhancers
  rs35831931 Coding nonsynonymous Exonic splicing enhancers
  rs1803985 mRNA Exonic splicing silencers
MSH2 rs17217716 Coding nonsynonymous Exonic splicing enhancers
  rs17217723 Coding nonsynonymous Exonic splicing enhancers
  rs17224367 Coding nonsynonymous Exonic splicing enhancers
  rs1802577 Coding nonsynonymous Exonic splicing enhancers
  rs33946261 Coding nonsynonymous Exonic splicing enhancers
  rs34136999 Coding nonsynonymous Exonic splicing enhancers
  rs34319539 Coding nonsynonymous Exonic splicing enhancers
  rs34986638 Coding nonsynonymous Exonic splicing enhancers
  rs35107951 Coding nonsynonymous Exonic splicing enhancers
  rs35717997 Coding nonsynonymous Exonic splicing enhancers
  rs35784190 Coding nonsynonymous Exonic splicing enhancers
  rs4987188 Coding nonsynonymous Exonic splicing enhancers
  rs12476364 intron intron/exon junctions
MSH6 rs1042821 Coding nonsynonymous Exonic splicing enhancers
  rs2020908 Coding nonsynonymous Exonic splicing enhancers
  rs2020912 Coding nonsynonymous Exonic splicing enhancers
  rs3136334 Coding nonsynonymous Exonic splicing enhancers
  rs3211299 Coding nonsynonymous Exonic splicing enhancers
  rs34014629 Coding nonsynonymous Exonic splicing enhancers
  rs35462442 Coding nonsynonymous Exonic splicing enhancers
  rs35552856 Coding nonsynonymous Exonic splicing enhancers
  rs35946687 Coding nonsynonymous Exonic splicing enhancers
  rs728619 Coding nonsynonymous Exonic splicing enhancers
  rs3211299 Coding nonsynonymous Exonic splicing silencers
  rs34938432 Coding nonsynonymous Exonic splicing silencers
PMS1 rs1145231 Coding nonsynonymous Exonic splicing enhancers
  rs1145232 Coding nonsynonymous Exonic splicing enhancers
  rs1145234 Coding nonsynonymous Exonic splicing enhancers
  rs2066456 Coding nonsynonymous Exonic splicing enhancers
  rs2066459 Coding nonsynonymous Exonic splicing enhancers
  rs5742932 mRNA Exonic splicing enhancers
  rs5742932 mRNA Exonic splicing silencers
  rs5742933 mRNA Exonic splicing silencers
PMS2 rs10254120 Coding nonsynonymous Exonic splicing enhancers
  rs1805318 Coding nonsynonymous Exonic splicing enhancers
  rs1805321 Coding nonsynonymous Exonic splicing enhancers
  rs1805322 Coding nonsynonymous Exonic splicing enhancers
  rs1805323 Coding nonsynonymous Exonic splicing enhancers
  rs2228007 Coding nonsynonymous Exonic splicing enhancers
  rs35629870 Coding nonsynonymous Exonic splicing enhancers
  rs35690297 Coding nonsynonymous Exonic splicing enhancers
  rs35911407 Coding nonsynonymous Exonic splicing enhancers
  rs35943120 Coding nonsynonymous Exonic splicing enhancers
  rs36038802 Coding nonsynonymous Exonic splicing enhancers
  rs35943120 Coding nonsynonymous Exonic splicing silencers