Crystal ID | AAG |
---|---|
Agglutinin A-Chain | Residues 1-250 |
Agglutinin B-Chain | Residues 5-267 |
Agglutinin C-Chain | Residues 1-250 |
Agglutinin D-Chain | Residues 5-267 |
X-ray wavelength (Å) | 1 |
Crystal system | tetragonal |
Space group name | P41212 |
Cell length a (Å) | 137.050 |
Cell length b (Å) | 137.050 |
Cell length c (Å) | 214.424 |
Cell volume (Å^3) | 4027462.2 |
Cell formula units Z | 16 |
Cell measurement temperature (K) | 100 |
Crystal shape | octahedron |
Crystal color | transparent |
Crystal size (mm^3) | 0.30 × 0.30 × 0.25 |
Colvent content (%) | 72.33 |
Matthews coefficient (Å^3/Da) | 4.45 |
Unique reflections | 73976 |
Averaged R_sym (outer sell) | 0.0727 (0.3600) |
Averaged I/FI (outer sell) | 11.9 (1.8) |
Completeness (%) (outer sell) | 99.1 (98.1) |
Redundancy (outer sell) | 4.1 (3.6) |
Resolution range of collection (Å) | 2.47 ~ 30.0 |
Resolution range of refinement (Å) | 2.6 ~ 19.88 |
R_cryst (outer sell) | 0.204 (0.211) |
R_free (outer sell) | 0.236 (0.256) |
No. of protein atoms | 8062 |
No. of water molecules | 169 |
No. of NAG atoms | 42 |
rms deviation from ideal bond length (Å) | 0.009 |
rms deviation from ideal bond angle (º) | 1.3 |
Isotropic thermal factor restraints | rms sigma |
Main chain bond (Å^2) | 1.87; 1.50 |
Main chain angle (Å^2) | 2.84; 2.00 |
Side chain bond (Å^2) | 2.87; 2.00 |
Side chain angle (Å^2) | 3.90; 2.50 |
Ramachandran plot [50] (% of residues) | |
in the most favored regions (A, B, L) | 81.7 |
in the additionally allowed regions (a, b, l, p) | 18.3% |