Skip to main content

Advertisement

Table 2 General data from the microarray analyses.

From: A maternal low protein diet has pronounced effects on mitochondrial gene expression in offspring liver and skeletal muscle; protective effect of taurine

Description Liver Muscle
Total number of probes on the Affymetrix Mouse 430 2.0 gene expression array 45101 45101
Number of probes present on at least one array 28653 30966
Above without control probes or probes without a valid EntrezGene identifier 27300 29443
Probes significantly changed in SAM preprocessing (FDR<10%) 6047 1559
Probes significantly changed (p<0.05) in two-way ANOVA 3678 1284
Probes significantly different (p<0.05) between NP and LP 2827 1272
Unique genes significantly different (p<0.05) between NP and LP 2363 1110
Known genes significantly different (p<0.05) between NP and LP 2012 967
Known genes different between NP and LP and fully rescued by taurine 510 423
Known genes different between NP and LP and partially rescued by taurine 90 21
Total number of known genes rescued by taurine 600 444
Percentage known genes different between NP and LP rescued by taurine 30% 46%
  1. A list of probe or gene numbers detailing the microarray gene expression analyses of liver and skeletal muscle of newborn mice, as described. NP) normal protein (20% casein) or LP) low protein (8% casein) during pregnancy. Table reprinted with permission from Wolters Kluwer Health / Lippincott Williams & Wilkins. [52]