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Table 2 Solvent accessibilities and Secondary structure analysis in the native and mutant proteins

From: In Silico profiling of deleterious amino acid substitutions of potential pathological importance in haemophlia A and haemophlia B

Mutation

Position

Solvent accessibility in the native and mutant proteins by GETAREA

Secondary structure analysis by DSSP

 

Changed from exposed to buried

Changed from buried to exposed

 

W274C

Thr (2), Tyr(5) Leu(7), Val(63), His(76), Ala(81), Pro(93), Ser(116), Ala(119), Glu(129), Lys(146), Tyr(155), Lys(185), Leu(187), Ala(194), Lys(213), Leu (217), Ile(310), Leu(319), Leu(327), Gln(335), Glu(340), Lys(344), Pro(349), Lys(399), Thr(400), Leu(419), Tyr(426), Lys(431), Lys(441), Ala(449), Thr(454), Lys(485), Arg(509), Gly(539), Thr(549), Ser(553), Glu(559), Glu(576), Asp(579), Gln(585), Lys(589), Val(592), Phe(598), Arg(602), Leu(614), Asn(631), Tyr(639), Ser(647), Ala(654), His(679), Leu(689), Val(697), Asn(713), Arg(719), Ser(728), Lys(732)

Trp(14), Leu(69), Gln(96), Val(99), Ser(138), Ser(176), Ser(179), Ile(405), Asn(299), Cys(329), Val(392), Arg(424), Tyr(473), Arg(503), Arg(546), Val(556), Pro(569), Gly(565), Asn(609), Gly(619), Ile(636), Trp(707)

T → H: Pro(86), Gly(89), Leu(203), Thr(208), Ser(428), Lys(518), Gly(638), His(1735), Thr(1763), Lys(1932), Asn(1934), Met(1945), Glu(2200)

H → T:Lys(161), Lys(185), Leu(187), Leu(562), Asn(601), Glu(608), Arg(612), Ser(630), Asp(1865), Gly(2022)

T → S:Trp(87), Leu(517), Asn(637), Asn(1772)

W2065R

Asp(1260), Gln(1336), Leu(1481), Ala(1610), Ile(1698), Tyr(1699), Arg(1708), Thr(1714), Glu(1723), Arg(1740), Gly(1769), Leu(1775), Ile(1782), Arg(1800), His(1867), Leu(1882), Trp(1908), Ala(1939), Asn(1941), Met(1945), Arg(1960), Ser(1968), Asn(1971), Phe(1982), Met(2007), Arg(2016), Ser(2082), Arg(2169)

Asn(1460), Gln(1705), Gly(1779), Leu(1808), Val(1876), Glu(1884), Glu(1904), Met(1842), Ile(1901), Tyr(1909), Thr(2015),

T → H:), His(1735), Thr(1763), Lys(1932), Asn(1934), Met(1945), Glu(2200)

H → T: Asp(1865), His(1867), Asp(2206)

T → S: Asn(1772)

W2248C

Asp(1260), Gln(1336), Asn(1460), Leu(1481), Ala(1610), Ile(1698), Tyr(1699), Arg(1708), Thr(1714), Glu(1723), Arg(1740), Gly(1769), Leu(1775), Ile(1782), Arg(1800), His(1867), Val(1876), Leu(1882), Trp(1908), Ala(1939), Asn(1941), Met(1945), Arg(1960), Ser(1968), Asn(1971), Phe(1982), Met(2007), Arg(2016), Gly(2028), Ala (2070)Ser(2082), Arg(2169)

Asn(1460), Gln(1705), Gly(1779), Leu(1808), Val(1876), Glu(1884), Glu(1904), Met(1842), Ile(1901), Tyr(1909), Thr(2015), Gly(2022), Ala(2070)

T → H:), His(1735), Thr(1763), Lys(1932), Asn(1934), Met(1945), Glu(2200)

H → T: Asp(1865), Gly(2022)

  1. T-Turn, H-Helix, S-Strand