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Table 3 HLA-DQA1 and-DPA1 gene haplotypes and T1DM

From: HLA class II SNP interactions and the association with type 1 diabetes mellitus in Bengali speaking patients of Eastern India

rs1047993, rs9272699, rs1048052, rs36219014 and rs707949

Haplotype

Control

Case

χ 2

p-value

CCACT

0.883

0.939

5.672

0.017

TACTC

0.060

0.051

0.255

0.614

TCACC

0.028

0.003

5.875

0.015

rs707963 and rs707962

Haplotype

Control

Case

χ 2

p-value

TT

0.897

0.937

3.202

0.074

GG

0.097

0.060

2.818

0.093

rs2308911 and rs2308912

Haplotype

Control

Case

χ 2

p-value

TA

0.650

0.663

0.107

0.744

AC

0.336

0.307

0.501

0.479

TC

0.015

0.022

0.436

0.509

  1. χ2=its chi square.