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Table 3 Variants classified as LLS without functional assay

From: CoDP: predicting the impact of unclassified genetic variants in MSH6 by the combination of different properties of the protein

No.

Variant

Definition of LLSa

IHC

MSI

Segregation study

FH

PTF

Healthy control =0 (N>100)

References

   

MLH1

MSH2

MSH6

      

6

L449P

2,3

Normal

Normal

Abnormal

H

ND

Abnormal

Abnormal

ND

[39]

7

C559Y

3

ND

ND

ND

ND

Abnormal

Abnormal

Abnormal

ND

[44]

8

P591S

2,3

Normal

Normal

Abnormal

H

ND

Abnormal

Abnormal

Abnormal

[40]

9

P623L

3

Normal

Normal

Abnormal

L

ND

Normal

Abnormal

Abnormal

[31]

10

G670R

2

Normal

Normal

Abnormal

H

ND

Normal

Normal

ND

[41]

11

R772W

2

Normal

Normal

Abnormal

H

ND

Normal

Normal

Inconclusive (0/95)

[42]

12

Y969C

2,3

Normal

Normal

Abnormal

H

Abnormal

Abnormal

Abnormal

Inconclusiveb

[43, 44]

13

G1069E

2

Normal

Normal

Abnormal

H

ND

Normal

Normal

ND

[45]

14

R1076C

3

Normal

Normal

Abnormal

ND

ND

Abnormal

Abnormal

ND

[47, 48]

15

A1236P

2,3

Normal

Normal

Abnormal

H

ND

Abnormal

NA

Abnormal

[46]

  1. Abbreviations: ND, not done, H, MSI-high, L, MSI-low.
  2. a See Table 1.
  3. b The number of healthy population is unknown.