Table 1 List of bacterial strains and primers
Name | Description a | Note b | Reference/Source |
|---|---|---|---|
Bacterial strain | |||
 YJ016 | wild-type strain |  | [37] |
 HL128 | MARTXVv1-deficient mutant |  | [10] |
 CJ189 | Δu1 mutant |  | This study |
 CJ427 | Δrid mutant |  | This study |
 CJ338 | Δu2 mutant |  | This study |
 CJ340 | Δcpd mutant |  | This study |
 CJ355 | Δgd mutant |  | This study |
 CJ433 | Δu1Δrid mutant |  | This study |
 CJ190 | Δu1Δu2 mutant |  | This study |
 CJ517 | ΔridΔu2 mutant |  | This study |
 CJ429 | Δu1ΔridΔu2 mutant |  | This study |
 KV105 | ΔvvhA mutant |  | [56] |
 KV188 | HL128 ΔvvhA mutant |  | [56] |
 CJ525 | CJ433 ΔvvhA mutant |  | This study |
 CJ527 | CJ529 ΔvvhA mutant |  | This study |
Primer | |||
 DU1F1 | 5′-TGTCGACGGGTCACAAAGTC-3’ | Δu1 |  |
 DU1R1 | 5′-AGGATCCAGACGCAGTGGTTGGCAC-3’ | Δu1 |  |
 DU1F2 | 5′-AGGATCCGCCGATACGCTGGTTGAGTTG-3’ | Δu1 |  |
 DU1R2 | 5′-TGAGCTCAGAAAGCCCTGCGAAGATCG-3’ | Δu1 |  |
 SC01 | 5′-AGAGCTCCTGGTTGAGTTGGATGTG-3’ | Δrid |  |
 SC02 | 5′-ATCTAGAACTCGGCTTCCAGATGTA-3’ | Δrid |  |
 SC03 | 5′-ATCTAGACACACATGGCGACCTAAG-3’ | Δrid |  |
 SC04 | 5′-AAGCATGCTACCGCTGCTTGCTCTGC-3’ | Δrid |  |
 DF1 | 5′-TTAGTCGACGTGTTTGGACGCCGACAGAG-3’ | Δu2 |  |
 DR1 | 5′-AGGATCCTTCTACCGCTGCTTGCTCTGC-3’ | Δu2 |  |
 DF2f4 | 5′-AGGATCCGTTGTTGTGACTCCGACAGC-3’ | Δu2 |  |
 DR2 | 5′-TGAGCTCCTGCTGCTCTGATCCAAACC-3’ | Δu2 |  |
 SC07 | 5′-AGAGCTCGGGTTGTTGAGTAAAGCG-3’ | Δcpd |  |
 SC08 | 5′-ATCTAGAGCCACTCAAACTGTCCTT-3’ | Δcpd |  |
 SC09 | 5′-ATCTAGAAACGGTATTGCGGAAGGC-3’ | Δcpd |  |
 SC10 | 5′-AAGCATGCACCCGCTAACTGCCCAAG-3’ | Δcpd |  |
 JL173 | 5′-TATGAGCTCCAACGCACCCTTCGGTTG-3’ | Δgd |  |
 JL174 | 5′-GCGTCTAGATAATATTCACCTTCCATT-3’ | Δgd |  |
 JL175 | 5′-GCGTCTAGACGGCAGGTTAAGCGAGTT-3’ | Δgd |  |
 JL176 | 5′-TATGAGCTCTTGGTTGAACTGGACTCG-3’ | Δgd |  |
 UVVA0965F | 5′-AAATGTCGACACCCACATTAA-3’ | ΔvvhA |  |
 UVVA0965R | 5′-AGAGAAAGCTTAAACAGAGTCAT-3’ | ΔvvhA |  |
 DVVA0965F | 5′-TCCCAAGCTTCCCACATTACAAC-3’ | ΔvvhA |  |
 DVVA0965R | 5′-GGAAGAGCTCACCAAACCCG-3’ | ΔvvhA |  |
 ERM-1 new | 5′-AACATATGGATCAAACTCAAGCCCCG-3’ | ERM |  |
 ERM-2 new | 5′-AACTCGAGGGTCCCTTTGGCATCATT-3’ | ERM |  |