Locus namea | Gene name and/or description | Presence of virulent genes in Pneumococcal isolates | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
SPS01 | SPS02 | SPS03 | SPS04 | SPS05 | SPS06 | SPS07 | SPS08 | SPS09 | SPS10 | ||
SP_0531 | blpI; bacteriocin | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
SP_0041 | blpU; bacteriocin | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 1 |
SP_0109 | bacteriocin | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 1 |
SP_0544 | immunity protein BlpX | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 1 |
SP_1315 | V-type ATP synthase subunit D | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
SP_1318 | V-type ATP synthase subunit F | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
SP_1319 | V-type ATP synthase subunit C | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
SP_1320 | V-type ATP synthase subunit E | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
SP_1321 | V-type ATP synthase subunit K | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
SP_1322 | V-type ATP synthase subunit I | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
SP_0346 | cpsA; capsular polysaccharide biosynthesis protein | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
SP_0347 | cpsB; capsular polysaccharide biosynthesis protei | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
SP_0348 | cpsC; capsular polysaccharide biosynthesis protein | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
SP_0349 | cpsD; capsular polysaccharide biosynthesis protein | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
SP_0350 | cpsE; capsular polysaccharide biosynthesis protein | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
SP_0117 | pspA; pneumococcal surface protein A | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
SP_0377 | cbpC; choline-binding protein C | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
SP_0378 | cbpJ; choline-binding protein J | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
SP_0390 | cbpG; choline-binding protein G | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
SP_0391 | cbpF; choline-binding protein F | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
SP_0533 | blpK; bacteriocin associated protein | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
SP_0545 | blpY; Immunity protein | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
SP_0641 | prtA; protective antigen A | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
SP_1638 | PsaR; transcriptional regulator | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
SP_0966 | pavA; adherence and virulence protein A | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
SP_1923 | pln; pneumolysin | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
SP_1937 | lytA; autolysin | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
SP_2190 | chpA; choline-binding protein A | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
SP_2201 | chpD; choline-binding protein D | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
SP_0457 | bacA; bacitracin resistance protein | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
SP_0615 | fibA; beta-lactam resistance factor | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
SP_1673 | penA; penicillin-binding protein 2B | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
SP_0369 | penicillin-binding protein 1A | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
SP_2099 | penicillin-binding protein 1B | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
SP_2010 | penicillin-binding protein 2A | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
SP_0336 | penicillin-binding protein 2X | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
SP_0616 | beta-lactam resistance factor | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
SP_0798 | ciaR; DNA-binding response regulator | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
SP_0799 | ciaH; sensor histidine kinase | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
SP_0972 | pmrA; multi-drug resistance efflux pump | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
SP_0461 | transcriptional regulator | 0 | 0 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 0 |