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Table 2 Genes with APA site switching between NPC and NNET tissues using a pair-wise case-control analysis

From: Differential genome-wide profiling of alternative polyadenylation sites in nasopharyngeal carcinoma by high-throughput sequencing

Pairs 3’UTR shortened genes 3’UTR lengthened genes Combined
NPC1 vs. NNET1 104 372 476
NPC1 vs. NNET2 179 192 371
NPC1 vs. NNET3 144 247 391
NPC1 vs. NNET4 58 242 300
NPC1 vs. NNET5 99 446 545
NPC1 vs. NNET6 51 123 174
NPC2 vs. NNET1 55 85 140
NPC2 vs. NNET2 91 13 104
NPC2 vs. NNET3 108 38 146
NPC2 vs. NNET4 100 85 185
NPC2 vs. NNET5 123 234 357
NPC2 vs. NNET6 184 106 290
NPC3 vs. NNET1 63 143 206
NPC3 vs. NNET2 104 23 127
NPC3 vs. NNET3 51 26 77
NPC3 vs. NNET4 79 103 182
NPC3 vs. NNET5 68 178 246
NPC3 vs. NNET6 149 111 260
NPC4 vs. NNET1 62 167 229
NPC4 vs. NNET2 210 104 314
NPC4 vs. NNET3 136 115 251
NPC4 vs. NNET4 158 236 394
NPC4 vs. NNET5 156 355 511
NPC4 vs. NNET6 133 125 258
NPC5 vs. NNET1 158 377 535
NPC5 vs. NNET2 193 116 309
NPC5 vs. NNET3 150 153 303
NPC5 vs. NNET4 55 112 167
NPC5 vs. NNET5 107 286 393
NPC5 vs. NNET6 66 82 148
NPC6 vs. NNET1 102 202 304
NPC6 vs. NNET2 137 24 161
NPC6 vs. NNET3 147 99 246
NPC6 vs. NNET4 53 58 111
NPC6 vs. NNET5 90 172 262
NPC6 vs. NNET6 139 76 215
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