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Table 1 Genomic characterization of serologically-untypable enteroviruses in northern Taiwan

From: Genomic analysis of serologically untypable human enteroviruses in Taiwan

Serotype by CODEHOP or NGS

Availability of IFA antibody

No. of isolates tested by NGS

No. of full genomes in public domain

Range of genomic identity

No. of genomic variants (identities ≤90%)

CV-A2

yes

10

14

85%

10

CV-A4

yes

4

6

97–98%

0

CV-A5

yes

5

6

96–97%

0

CV-A6

yes

5

127

98%

0

CV-A9

yes

2

25

92–99%

0

CV-A10

yes

2

65

82–86%

2

CV-A16

yes

1

105

99%

0

CV-B4

yes

6

29

96–97%

0

E3

no

7

16

85–87%

7

E6

yes

3

21

88–96%

1

E9

yes

2

12

89–90%

2

E25

no

3

7

97%

0

E30

yes

7

18

97–99%

0

PV 1

no

1

258

99%

0

EV-D68

no

1

388

97%

0

RV-A39*

no

1

3

93%

0

HPeV 1*

no

1

38

85%

1

Total

 

59

  

23

  1. * Sample cannot be identified by CODEHOP method