Table 2 Top sequence identity identified in BLAST analysis of 29 genomic variants

CVA2 (10)

MF422534-MF422543

CVA2 Australia 2010 MF678310

88%

EVA114 India 2013 KU355876

87%

EVA114 India 2013 KU355876

89%

unknown

(CVA2 Japan2003 AB162722)^a

(93%)^a

CVA2 Australia 2008 MF678333

86%

CVA2 Australia 2008 MF678333

88%

CVA10 (2)

MF422531

CVA10 Australia 2007 MF678312

86%

CVA2 China 2013 KX156350

85%

CVA6 TW 2007 KR706309

96%

P1-P2,P2-P3

(CVA10 China 2008 GQ214174)^a

(97%)^a

MF422532

CVA10 China 2013 KP009581

85%

CVA2 Australia 2010 MF678310

86%

CVA2 Australia 2010 MF678310

91%

unknown

(CVA10 Australia 2007 MF678312)^a

(86%)^a

Echo3 (7)

MF422567-MF422572

Echo3 Japan 2010 AB647320

94%

Echo33 Thailand 2011 KU574620

83%

Echo3 Thailand 2010 KU574635

94%

P1-P2,P2-P3

KT353723

Echo3 Thailand 2010 KU574635

92%

Echo3 Finland 2006 AJ849942

82%

EVB85 USA 2007 AY843303

86%

unknown

Echo6 (1)

MF422579

Echo6 China 2009 KP266568

95%

Echo25 Germany 2010 KX139459

82%

Echo25 Germany 2010 KX139459

88%

P1-P2

Echo9 (2)

MF422580

Echo 9 Finland 2002 AF524867

92%

Echo6 TW 2008 KT353724

88%

Echo6 TW 2008 KT353724

89%

P1-P2

MF422581

Echo9 USA 2016 KX681481

92%

Echo 9 USA 2016 KX681481

88%

Echo 18 Germany 2010 KX139456

88%

unknown

(Echo9 Finland 2012 KC238669)^b

(92%)^b

(Echo 9 Finland 2012 KC238669)^b

(83%)^b

(Echo 9 Finland 2012 KC238669)^b

(79%)^b

(Echo 30 TW 2006 EF066392)^b

(69%)^b

(Echo 30 TW 2006 EF066392)^b

(83%)^b

(Echo 30 TW 2006 EF066392)^b

(86%)^b

HPeV1 (1)

KT726985

HPeV 1 Netherlands 2007 GQ183034

88%

HPeV1 Netherlands 1993 GQ183022

85%

HPeV 1 China 2009 JX441355

86%

unknown

(HPeV 1 Australia 2010 MG712784)^a

(87%)^a