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Table 1 Summary of the transcriptome data and genome mapping from glucose- and acetate-grown C. glabrata samples

From: Transcriptomic and proteomic profiling revealed reprogramming of carbon metabolism in acetate-grown human pathogen Candida glabrata

Sample group

Glucose-grown C. glabrata

Acetate-grown C. glabrata

Glu 1

Glu 2

Glu 3

Ace 1

Ace 2

Ace 3

Total raw reads

11,167,982

11,067,988

11,108,556

11,026,716

10,713,412

10,502,714

Total clean reads

11,069,487

10,968,492

11,012,892

10,927,921

10,615,974

10,400,162

 Paired reads

11,035,394

10,934,808

10,978,978

10,894,900

10,583,306

10,368,454

 Orphan reads

34,093

33,684

33,914

33,021

32,668

31,708

GC content (%)

44

45

45

45

43

44

Reads uniquely mapped

10,260,577 (93.0%)

10,186,208 (93.1%)

10,292,990 (93.7%)

10,177,516 (93.4%)

9,997,771 (94.5%)

9,733,441 (93.9%)

Reads multiply mapped

380,256 (3.4%)

325,515 (3.0%)

315,263 (2.9%)

163,869 (1.5%)

137,062 (1.3%)

147,681 (1.4%)

Reads unmapped

394,561 (3.6%)

423,085 (3.9%)

370,725 (3.4%)

553,515 (5.1%)

448,473 (4.2%)

487,332 (4.7%)