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Table 1 Summary of the transcriptome data and genome mapping from glucose- and acetate-grown C. glabrata samples

From: Transcriptomic and proteomic profiling revealed reprogramming of carbon metabolism in acetate-grown human pathogen Candida glabrata

Sample group Glucose-grown C. glabrata Acetate-grown C. glabrata
Glu 1 Glu 2 Glu 3 Ace 1 Ace 2 Ace 3
Total raw reads 11,167,982 11,067,988 11,108,556 11,026,716 10,713,412 10,502,714
Total clean reads 11,069,487 10,968,492 11,012,892 10,927,921 10,615,974 10,400,162
 Paired reads 11,035,394 10,934,808 10,978,978 10,894,900 10,583,306 10,368,454
 Orphan reads 34,093 33,684 33,914 33,021 32,668 31,708
GC content (%) 44 45 45 45 43 44
Reads uniquely mapped 10,260,577 (93.0%) 10,186,208 (93.1%) 10,292,990 (93.7%) 10,177,516 (93.4%) 9,997,771 (94.5%) 9,733,441 (93.9%)
Reads multiply mapped 380,256 (3.4%) 325,515 (3.0%) 315,263 (2.9%) 163,869 (1.5%) 137,062 (1.3%) 147,681 (1.4%)
Reads unmapped 394,561 (3.6%) 423,085 (3.9%) 370,725 (3.4%) 553,515 (5.1%) 448,473 (4.2%) 487,332 (4.7%)