From: Distribution of papG alleles among uropathogenic Escherichia coli from reproductive age women
Trait | Number (%) of isolates | P valued | ||||||
---|---|---|---|---|---|---|---|---|
Phylogenetic Group or VFa gene | papG negb (n = 117) | papG posc (n = 190) | papGII +  (n = 52) | papGIII +  (n = 95) | papGIV +  (n = 4) | papGII + papGIII (n = 21) | papG neg vs. papG pos | papGII vs papGIII |
A | 2 (2) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | eNS | NS |
B1 | 2 (2) | 0 (0) | 0 (0) | 2 (2) | 0 (0) | 0 (0) | NS | NS |
B2 | 82 (70) | 149 (78) | 52 (100) | 86 (91) | 0 (0) | 21 (100) | 0.037 | 0.027 |
C | 6 (5) | 4 (2) | 2 (4) | 4 (4) | 2 (5) | 0 (0) | NS | NS |
D | 13 (11) | 14 (7) | 2 (4) | 12 (13) | 0 (0) | 1 (5) | NS | NS |
E | 7 (6) | 7 (4) | 1 (2) | 4 (4) | 1 (25) | 0 (0) | NS | NS |
F | 3 (3) | 12 (6) | 1 (2) | 5 (5) | 1 (25) | 1 (5) | NS | NS |
Clade 1 | 2 (2) | 4 (2) | 1 (2) | 1 (1) | 0 (0) | 0 (0) | NS | NS |
afa | 23 (20) | 10 (5) | 0 (0) | 3 (3) | 0 (0) | 9 (42) |  < 0.001 | NS |
bmaE | 0 (0) | 0 (0) | 0 (0) | 5 (5) | 0 (0) | 0 (0) | NS | NS |
cnf1 | 22 (19) | 108 (57) | 23 (44) | 35 (37) | 2 (50) | 18 (86) |  < 0.001 | NS |
fimH | 108 (92) | 190 (100) | 52 (100) | 93 (98) | 4 (100) | 21 (100) |  < 0.001 | NS |
focG | 42 (36) | 78 (41) | 18 (35) | 21 (22) | 1 (25) | 21 (100) | NS | NS |
fyuA | 73 (62) | 110 (58) | 26 (50) | 39 (41) | 2 (50) | 18 (86) | NS | NS |
gafD | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 0 (0) | 2 (9) | NS | NS |
hlyA | 45(38) | 105 (55) | 35 (67) | 44 (46) | 2 (50) | 18 (86) | 0.005 | 0.016 |
iutA | 63 (54) | 139 (73) | 44 (85) | 49 (52) | 2 (50) | 19 (92) |  < 0.001 |  < 0.001 |
kpsII | 47 (40) | 116 (61) | 30 (58) | 30 (32) | 2 (50) | 16 (77) | 0.003 | 0.003 |
kpsIII | 6 (5) | 6 (3) | 2 (4) | 0 (0) | 0 (0) | (23) | NS | NS |
papAH | 78 (67) | 156 (82) | 48 (92) | 77 (81) | 3 (75) | 21 (100) | 0.002 | NS |
papC | 77 (66) | 162 (85) | 49 (94) | 74 (78) | 3 (75) | 21 (100) |  < 0.001 | NS |
papEF | 75 (64) | 154 (81) | 49 (94) | 77 (81) | 3 (75) | 21 (100) | 0.001 | NS |
sfaS | 21 (18) | 63 (33) | 18 (35) | 25 (26) | 1 (25) | 16 (77) | 0.004 | NS |
traT | 85 (73) | 148 (78) | 37 (72) | 77 (78) | 3 (75) | 21 (100) | NS | NS |
ompT | 78 (67) | 137 (72) | 32 (62) | 60 (63) | 3 (75) | 17 (82) | NS | NS |
usp | 81 (69) | 135 (71) | 30 (58) | 66 (69) | 3 (75) | 18 (86) | NS | NS |
f,gVF score (Median, range) | 3 (1–7) | 5 (2–13) | 7 (3–12) | 5 (1–10) | 6 (1–9) | 14(10–13) | 0.001 | 0.016 |