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Table 4 Spearman's correlation coefficient (rho)

From: TagSNP transferability and relative loss of variability prediction from HapMap to an admixed population

r 2

CHB+JPT

CEU

YRI

POOL

PTPN22

0.697

0.813

0.543

0.949

HMGCR

0.853

0.816

0.862

0.902

VDR

0.312

0.742

0.321

0.639

CETP

0.821

0.785

-0.018*

0.912

overall

0.491

0.782

0.431

0.719

  1. Correlation of LD measures (r2) for all SNP pairs between BRA and HapMap populations. * p-value not significant, all others were statistically significant (p < 0.05).
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Journal of Biomedical Science

ISSN: 1423-0127