Region | Primer | Orientation | Sequence (5’-3’)a | Positionb | Reference |
---|---|---|---|---|---|
VP1 | 292 | Sense | MIGCIGYIGARACNGG | 2613–2628 | 30 |
222 | Antisense | CICCIGGIGGIAYRWACAT | 2969–2951 | ||
VP2 | AM12 | Sense | GARGARTGYGGITAYAGYGA | 962–981 | 31 |
AM32 | Antisense | TTDATCCAYTGRTGIGG | 1545–1529 | ||
VP3 | RC7 | Sense | GTVHDIAAYGCIGGHATGGG | 1463-1482 | This study |
RC8 | Antisense | GTYTGCATIGTGTCDSHIGG | 2597-2578 | ||
VP4 | RC1 | Sense | CCATATAGYTATTGGATTGGC | 615-635 | This study |
RC2M | Antisense | GGIARYTTCCACCACCAHCC | 1197-1178 | ||
VP1-2A | RC5M | Sense | TIACITTTGTSATHACIAG | 2799-2817 | This study |
RC6 | Antisense | ACIACRCCYTCICCICCCAT | 3690-3671 | ||
 | RC10 | Antisense | TCCCACACRCAVYTYWGCC | 3396-3378 | This study |
 | RC5-B2 | Sense | CTAACWTTYGTCATNACCAG | 2813-2832 | This study |
 | RC5-B4 | Sense | CTYACMTTTGTSATYACYAG | 2802-2821 | This study |
 | RC5-B3 | Sense | CTGACGTTTGTCATAACAAG | 2798-2817 | This study |
 | RC5(B5/B6) | Sense | GARYTVACYTTTGTSATHAC | 2801-2820 | This study |
 | RC11(B2,B4,B5,B6) | Antisense | TCYCTRTTRTARTCYTCCC | 3417-3399 | This study |
 | RC12(B3) | Antisense | TCYCTGTTGTAACTTTCCC | 3411-3393 | This study |