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Table 2 Bacterial RNase E/G homologues represented in the NCBI protein database

From: Composition and conservation of the mRNA-degrading machinery in bacteria

Phylum/Class

Length (aa)

Potential to form degradosome- like complex

Organisms tested for the presence of degradosome-like complexes/Reference

  

Predicted based on the size of the protein

Experimentally verified

 

Actinobacteria

463-1373

+

+

S. coelicolor /[55]

M. tuberculosis; M. bovis /[56]

Aquificae

466-470

-

-

 

Bacteroidetes/Chlorobi

503-570

-

-

 

Chlamydiae/Verrucomicrobia group

510-554

-

-

 

Cyanobacteria

602-808

-

-

 

Deferribacteres

507

-

-

 

Elusimicrobia

488

-

-

 

Fibrobacteres/Acidobacteria group

511

-

-

 

Firmicutes

    

   Bacilli

441-615

-

-

 

   Clostridia

393-571

-

-

 

Fusobacteria

432-458

-

-

 

Gemmatimonadetes

520

-

-

 

Nitrospirae

514-522

-

-

 

Planctomycetes

509-588

-

-

 

Proteobacteria

    

   Alpha

411-1123

+

+

R. capsulatus/[54]

C. crescentus[52]

   Beta

394-1125

+

-

 

   Gamma

410-1302

+

+

E. coli/[32, 33]

P. syringe/[50]

V. angustum S14 RNase E [46]

P. haloplanktis[49]

   Delta

486-926

+

-

 

Synergistetes

495-547

-

-

 

Thermotogae

454-481

-

-

 
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Journal of Biomedical Science

ISSN: 1423-0127