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Table 1 miR-200a putative target site in St3gal3 and St3gal4 mRNA using different target prediction software

From: Control of post-translational modifications in antithrombin during murine post-natal development by miR-200a

miRNA target prediction software

Parameters

St3gal3

St3gal4

TargetScan (release 5.2)[17]

Seed match

7mer-m8

7mer-m8

Context score percentile

85

75

PCT

0.35

0.17

Pictar[18]

Score

4.67

-

Target site number

1

-

Free energy (Kcal/mol)

−21.4

-

microRNA.org[19]

mirSVR score

−0.9262

−0.2421

PhastCons score

0.5877

0.5271