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Table 4 Metastasis-associated biological functions of selected target transcripts of miRNA-5p and -3p sister pairs 1

From: MicroRNA-5p and -3p co-expression and cross-targeting in colon cancer cells

miRNA family

miRNA

Chrom’l location

Expression

Selected target mRNAs2

Functions3

let-7

let-7 g-5p

3p21.1

Up-reg’d

IGF1R*

Angiogenesis, apoptosis

    

MYC*

Angiogenesis, apoptosis, cancer, Jak-STAT, MAPK & Wnt signaling

 

let-7 g-3p

 

Up-reg’d

ZEB1

EMT, transcriptional misregulation in cancer

    

NLK

Angiogenesis, MAPK & Wnt signaling

 

let-7d-5p

9q22.32

Up-reg’d

IGF1R*

Angiogenesis, apoptosis

    

THBS1*

Angiogenesis, cell cycle, p53 signaling, cancer

 

let-7d-3p

 

Down-reg’d

KRAS

Apoptosis, MAPK & VEGF signaling, cancer

    

PRKACB

Apoptosis, MAPK, Wnt & Hedgehog signaling

 

let-7i-5p

12q14.1

Up-reg’d

TLR4*

Toll-like receptor signaling, inflammatory response

    

IL13*

Cell-cell signaling, Jak-STAT, Toll-like receptor signaling, cytokine-cytokine receptor interaction

 

let-7i-3p

 

Up-reg’d

DLX5

Cell proliferation

    

ACTB

Focal adhesion, leukocyte transendothelial migration

mir-8/200

miR-200a-5p

1p36.33

Up-reg’d

ZEB2

EMT, Wnt signaling

    

FGF4

Apoptosis, MAPK signaling

 

miR-200a-3p

 

Up-reg’d

ZEB1*

EMT, transcriptional misregulation in cancer

    

ZEB2*

EMT, Wnt signaling

 

miR-200b-5p

1p36.33

Down-reg’d

ZEB2

EMT, Wnt signaling

    

PRDM6

Chromatin modification

 

miR-200b-3p

 

Up-reg’d

ZEB1*

EMT, transcriptional misregulation in cancer

    

MLH1

Mismatch repair, cancer

 

miR-141-5p

12p13.31

Up-reg’d

ATM

Apoptosis, cell cycle, p53 signaling, cancer

    

CLDN1

Cell adhesion, leukocyte transendothelial migration

 

miR-141-3p

 

Up-reg’d

MYC*

Angiogenesis, apoptosis, cancer, Jak-Stat, MAPK & Wnt signaling

    

TP53*

Angiogenesis, apoptosis, cell cycle, MAPK, p53 & Wnt signaling, cancer

mir-17

miR-17-5p

13q31.3

Up-reg’d

THBS1*

Angiogenesis, cell cycle, p53 signaling, cancer

    

E2F1*

Apoptosis, cell cycle, cancer

 

miR-17-3p

 

Up-reg’d

CD44

Angiogenesis, inflammation, cancer

    

MYB

Cancer

 

miR-18a-5p

13q31.3

Up-reg’d

THBS1*

Angiogenesis, cell cycle, p53 signaling, cancer

    

HIF1A*

Angiogenesis, cell migration, VEGF signaling

 

miR-18a-3p

 

Up-reg’d

KRAS*

Apoptosis, MAPK & VEGF signaling, cancer

    

CASP7

Apoptosis

 

miR-20a-5p

13q31.3

Up-reg’d

THBS1*

Angiogenesis, cell cycle, p53 signaling, cancer

    

E2F1*

Apoptosis, cell cycle, cancer

 

miR-20a-3p

 

Up-reg’d

KRAS

Apoptosis, MAPK & VEGF signaling, cancer

    

PCNA

Cell cycle, cancer

  1. 1A complete list of predicated/validated target transcripts and putative regulated biological functions is presented in Additional file 5. 2Asterisks in the column indicate validated targets as tabulated in miRBase. 3Data were derived from the Gene Ontology Annotation Database (UniProt-GOA) and the KEGG Pathway databases.