Table 1 Bacterial strains and sources used for the genomic comparison of S. pneumoniae strains
Isolate | Isolation date | Sex | Source | Serotypea |
|---|---|---|---|---|
SPS1 | 15/9/2010 | NA | Nasopharyngeal swab | NT |
SPS2 | 21/5/2011 | Female | Nasopharyngeal swab | 1 |
SPS3 | 21/5/2011 | Male | Nasopharyngeal swab | 19F |
SPS4 | 20/2/2012 | Female | Nasopharyngeal swab | 14 |
SPS5 | 16/3/2012 | Female | Swab from eye | 23F |
SPS6 | 18/5/2012 | Male | Nasopharyngeal swab | 15B/C |
SPS7 | 9/5/2011 | Male | Blood | 1 |
SPS8 | 8/3/2011 | Female | Nasopharyngeal swab | 14 |
SPS9 | 26/4/2011 | Male | Blood | 18 |
SPS10 | 10/5/2011 | Male | Blood | 8 |